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This repository provides course material for a workshop offered as part of Roswell Park Comprehensive Cancer Center 2024 graduate course “Principles of Computational Oncology”.

Installation

Workshop participants do not need to install anything. Others may install this package using the following commands.

## install.packages("devtools")
devtools::install_github("mtmorgan/RPG520")

Content

Day 1 introduces the CCR ‘OnDemand’ compute environment, and the basics of R.

Day 2 provides two cases studies illustrating use of R for data management, visualization, and statistical analysis.

Day 3 illustrates additional cases studies with a computational oncology emphasis.

The appendix provides instructions on installing R and RStudio, managing packages, and retrieving data sets used in workshop.