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Read 'h5ad' Files as R / Bioconductor Objects

training_read_h5ad.Rd

read_h5ad_as_sce() uses the Python h5ad module and R 'anndata' package to import the .h5ad objects into R / Bioconductor 'SingleCellExperiment'.

Usage

training_read_h5ad_as_sce(h5ad_file_path)

training_read_h5ad_as_seurat(h5ad_file_path)

Arguments

h5ad_file_path

character(1) path to the .h5ad file.

Value

training_read_h5ad_as_sce() returns an R / Bioconductor SingleCellExperiment object. The assay data X is the (sparse) matrix named 'X' in the h5ad file.