Changelog

Source: NEWS.md

cellxgenedp 1.8

SIGNIFICANT USER-VISIBLE CHANGES

• (v 1.7.2) Add vignette ‘Case studies’, include identifying dataset authors and using ontolgies to identify datasets

• (v 1.7.1) Update vignette section on dataset visualization to

BUG FIXES

• (v 1.7.3) Use all collections, datasets, files to determine available columns

cellxgenedp 1.6

SIGNIFICANT USER-VISIBLE CHANGES

• (v 1.6.1) Update vignette section on dataset visualization to accomodate changes in the ‘Discover’ API. https://github.com/mtmorgan/cellxgenedp/issues/15

cellxgenedp 1.6

• (v 1.5.2) use CELLxGENE ‘Discover’ API, changing column names of some return values. See ‘API changes’ of the ‘Discover and download datasets…’ vignette.

BUG FIXES

• (v 1.6.2) Use all collections, datasets, and files when identifying available columns.

cellxgenedp 1.4

SIGNIFICANT USER-VISIBLE CHANGES

• (v 1.3.3) add publisher_metadata(), authors(), and links() to make access to nested ‘collections()’ data more straight-forward

cellxgenedp 1.2

SIGNIFICANT USER-VISIBLE CHANGES

• (v. 1.1.4) allow custom files_download() cache. Thanks @stemangiola, https://github.com/mtmorgan/cellxgenedp/pull/9

• (v. 1.1.6) datasets ethnicity field renamed to self_reported_ethnicity

• (v. 1.1.7) use zellkonverter’s basilisk-based Python parser to read H5AD files in the vignette, see https://github.com/theislab/zellkonverter/issues/78

OTHER

• (v. 1.1.2) reset cache on build machines weekly

• (v. 1.1.6) use {rjsoncons} CRAN package for queries, rather than local implementation. Thanks @LiNk-NY, https://github.com/mtmorgan/cellxgenedp/pull/12

cellxgenedp 0.0.7

• (v. 0.0.7) make errors during local cache update more accessible; see https://github.com/mtmorgan/cellxgenedp/issues/1