https://mtmorgan.github.io/RPG520

This three-day workshop introduces R (mostly) and Bioconductor for working with data. It is part of the Roswell Park graduate course ‘Principles of Computational Oncology’. The course uses the University at Buffalo CCR cluster, introducing participants to the primary computational resource available outside personal laptops. Day 1 provides a basic introduction to R, RStudio, and packages. Day 2 walks through a couple of case studies illustrating R use of data management, exploratory analysis, and visualization. Day 3 focuses on working with scRNASeq data (at a high level – producing an interactive UMAP plot from pre-computed values), as well as a look at survival analysis.